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NotesBiology HLTopic 1.2Sugar–phosphate bonding and the sugar–phosphate backbone
Back to Biology HL Topics
1.2.34 min read

Sugar–phosphate bonding and the sugar–phosphate backbone (Biology HL)

IB Biology · Unit 1

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Contents

  1. 1The sugar–phosphate backbone at Higher Level
  2. 2Nucleotides join by covalent bonds
  3. 3A strong sugar–phosphate backbone
  4. 4Exam-style question (step by step)
The sugar–phosphate backbone at Higher Level: The same statement as SL. At HL each link also has a direction: it joins carbon 3′ of one sugar to carbon 5′ of the next, which gives each strand a 5′ end and a 3′ end. Learn the backbone here; the direction builds on it.

Practise this as you read

  • Name the backbone bond: covalent, or phosphodiester.
  • Explain why the backbone is strong: a continuous chain of covalent bonds.

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The big idea: A strand of DNA or RNA is nucleotides joined in a line. Each link is a covalent bond from the sugar of one nucleotide to the phosphate of the next.

The points to remember

  • Nucleotides join in a line: the sugar of one nucleotide bonds to the phosphate of the next.
  • The bond is covalent: atoms share electrons. Its full name is a phosphodiester bond.
  • The same kind of bond links nucleotides in DNA and in RNA.
Remember it as: Sugar to phosphate, sugar to phosphate: covalent all the way.
Three nucleotides drawn one by one, each sugar joined to the next phosphate by a line, then the phosphate-sugar chain circled as the backbone
Building a strand: each new nucleotide is joined sugar to phosphate.

In the drawing, every line between a pentagon and the next circle is one of these covalent bonds.

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The big idea: The covalent links make one continuous chain along each strand: the sugar–phosphate backbone. Because every link is covalent, the backbone is strong.

The points to remember

  • Sugar, phosphate, sugar, phosphate: one continuous chain of covalently bonded atoms runs along each strand.
  • That chain is the sugar–phosphate backbone.
  • Every link is covalent, so the backbone is strong and does not break easily.
  • The bases stick out to one side of the backbone, one on each sugar.
  • DNA and RNA have the same kind of backbone; only the sugar differs (deoxyribose or ribose).
Covalent, not hydrogen: The bonds along the backbone are covalent. Hydrogen bonds join the bases of two strands, never the backbone.
Three nucleotides joined into a strand; a dashed outline circles the chain of phosphates and sugars, labelled sugar-phosphate backbone; the bases stick out to the rightThree nucleotides joined into a strand; a dashed outline circles the chain of phosphates and sugars, labelled sugar-phosphate backbone; the bases stick out to the right
The backbone: phosphate, sugar, phosphate, sugar, all joined by covalent bonds.
Real example: the Neanderthal genome: In 2010 scientists read most of the Neanderthal genome from bones about 40 000 years old. Short pieces of DNA survived that long because their backbones are chains of covalent bonds.
How it is asked: A drawn strand with a letter on one bond, and one mark for naming the bond. A second short part can ask why the backbone is strong.
A strand of four nucleotides drawn as circles, pentagons and rectangles with bases G, A, T, C; Z points to the line joining the second sugar to the third phosphateA strand of four nucleotides drawn as circles, pentagons and rectangles with bases G, A, T, C; Z points to the line joining the second sugar to the third phosphate
Part of a nucleic acid. Z marks one link in the backbone.
IB-style questionIdentify[1 mark]

The diagram shows part of a nucleic acid. Identify the type of bond indicated by Z.

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And the follow-on part, two points for two marks:

IB-style questionOutline[2 marks]

Outline why the sugar–phosphate backbone of DNA is strong.

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IB Exam Questions on Sugar–phosphate bonding and the sugar–phosphate backbone

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How Sugar–phosphate bonding and the sugar–phosphate backbone Appears in IB Exams

Examiners use specific command terms when asking about this topic. Here's what to expect:

  • Define

    Give the precise meaning of key terms related to Sugar–phosphate bonding and the sugar–phosphate backbone.

    AO1
  • Describe

    Give a detailed account of processes or features in Sugar–phosphate bonding and the sugar–phosphate backbone.

    AO2
  • Explain

    Give reasons WHY — cause and effect within Sugar–phosphate bonding and the sugar–phosphate backbone.

    AO3
  • Evaluate

    Weigh strengths AND limitations of approaches in Sugar–phosphate bonding and the sugar–phosphate backbone.

    AO3
  • Discuss

    Present arguments FOR and AGAINST with a balanced conclusion.

    AO3

See the full IB Command Terms guide

Related Biology HL Topics

Continue learning with these related topics from the same unit:

1.1.1Water as the medium for life1.1.2Hydrogen bonds from the polar covalent bonds in water1.1.3Cohesion of water and its consequences for organisms1.1.4Adhesion of water to polar or charged materials
View all Biology HL topics
Improve your exam techniqueCommand terms, paper structure, and mark-scheme tips for Biology HL
Previous1.2.2Components of a nucleotideNextBases in each nucleic acid that form the basis of a code1.2.4

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