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NotesBiology HLTopic 4.5Gene expression and why cells differ
Back to Biology HL Topics
4.5.13 min read

Gene expression and why cells differ

IB Biology • Unit 4

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Contents

  • What 'gene expression' means
  • Why cells differ even with identical DNA
  • Exam-style question
The big idea: A gene is just a set of instructions in DNA. On its own it does nothing.

A gene is expressed when the cell actually uses it — it is transcribed (copied into mRNA) and translated (read by a ribosome) to build the protein that the gene codes for.

So gene expression = transcription + translation, ending in the gene's protein product.

A gene that is switched off is never transcribed, so no mRNA and no protein are made — even though the gene is still sitting in the DNA.

Gene expression = transcription + translation. A gene is 'expressed' when its DNA is transcribed into mRNA and that mRNA is translated into a protein. A gene that is NOT expressed is never copied into mRNA, so its protein is never made.

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Gene
A length of DNA that codes for one protein (the gene's product).
Gene expression
The transcription and translation of a gene to make its protein. A gene is 'expressed' when its protein is being produced.
Gene product
The protein that a gene codes for — the end result of expressing that gene.
Switched on / off
An expressed gene is 'switched on'; a gene that is not transcribed is 'switched off' (silent), so its protein is not made.
Genome
The complete set of genes (all the DNA) in a cell.
Having a gene ≠ using a gene: Every cell has thousands of genes, but only uses some of them at any time.

Think of the genome as a cookbook and expression as actually cooking a recipe. Owning the recipe does nothing — the dish only appears when you read it and cook (transcribe and translate).

Here is the puzzle. A neuron in your brain and a cell in your liver look and behave completely differently — yet they contain exactly the same DNA.

Every body cell came from one zygote by mitosis, which copies the whole genome faithfully. So the difference between cell types cannot come from different genes — they all carry the same set.

The answer: differential gene expression: Cells differ because they express different genes.

Out of the same full genome, each cell type switches on only a subset of its genes and leaves the rest off. This is called differential gene expression.

Because different genes are switched on, each cell type transcribes and translates a different set of proteins — and it is the proteins that give a cell its structure and function.

The cause → effect chain

  • Every cell carries the same DNA (the same full genome).
  • Each cell type switches on a different subset of genes (differential expression).
  • The switched-on genes are transcribed and translated into proteins.
  • So each cell makes a different mix of proteins.
  • Those proteins build and run the cell → different structure and function.
StepWhat happensWhy cells end up different
1. Same DNAMitosis copies the whole genome into every body cellDifference is NOT in the DNA — all cells share it
2. Differential expressionEach cell type switches ON only a subset of its genesDifferent genes are transcribed in different cells
3. Transcription + translationThe switched-on genes are made into mRNA, then proteinEach cell makes a different MIX of proteins
4. Structure & functionThose proteins build and run the cellNeuron ≠ liver cell, even with identical DNA
Worked example — neuron vs liver cell: A neuron switches on genes for ion channels and neurotransmitter enzymes, so it is built to carry electrical signals.

A liver cell keeps those genes off but switches on genes for detox enzymes and glycogen handling, so it is built to process the blood.

Same DNA, different genes expressed → different proteins → different cell. A red-blood-cell precursor makes the difference obvious: it switches on the haemoglobin gene (which stays off in a neuron), so it fills with haemoglobin while the neuron never does.
Neuron (nerve cell)Hepatocyte (liver cell)
Genome (DNA)The SAME full set of genesThe SAME full set of genes — identical to the neuron's
Genes switched ONGenes for ion channels, neurotransmitter enzymes, signalling proteinsGenes for detox enzymes, glycogen-handling enzymes, blood-protein production
Genes switched OFFMost liver-specific genes are silentMost neuron-specific genes are silent
Proteins actually madeMostly nerve-signalling proteinsMostly liver-metabolism proteins
ResultA long, branched cell that carries electrical signalsA cube-shaped cell that filters blood and stores glucose

Two cells with identical DNA differ because they run this pathway for DIFFERENT genes. A neuron expresses its set of genes; a liver cell expresses a different set — so each ends up with a different mix of proteins, structure and function.

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Differentiation = a stable expression pattern: When a cell differentiates (becomes a neuron, a liver cell, a muscle cell), it settles into a stable pattern of which genes are switched on.

That pattern is kept up over the cell's life and usually passed to its daughter cells, which is why a liver cell keeps making liver-cell daughters.

So a 'cell type' is really just a particular set of expressed genes.

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How this is tested: The classic HL question gives you two very different cells with identical DNA and asks you to explain how they can differ.

The marks live in the chain: same genome in every cell → each expresses a different subset of genes (differential gene expression) → genes are transcribed and translated into different proteins → different structure and function.

Finish with the key term — gene expression = transcription + translation — and the idea that differentiation is a stable pattern of which genes are switched on.

IB-style question — same DNA, different cells

A neuron and a liver cell in the same person contain identical DNA, yet have very different structures and functions. Explain how this is possible. [4]

How to score all four marks

  1. Same genome. Both cells came from one zygote by mitosis, so they carry the same full set of genes — the difference is not in the DNA.
  2. Differential gene expression. Each cell type switches on only a subset of its genes and keeps the rest off — this is differential gene expression.
  3. Different proteins. Because different genes are transcribed and translated, the two cells make different proteins (gene expression = transcription + translation).
  4. Different structure/function. Those different proteins give each cell its own structure and function, e.g. a neuron expresses ion-channel genes while a liver cell expresses detox-enzyme genes. (Award 1 per distinct point, max 4.)

Final answer

Both cells share the same DNA, but they express different genes (differential gene expression). Different genes are transcribed and translated, so each cell makes a different set of proteins, giving it a different structure and function — e.g. a neuron switches on ion-channel genes that a liver cell keeps off.

✓ Why this scores full marks: It nails the paradox — same DNA but different genes expressed — and follows the chain all the way to different proteins → different cell.

A common way to lose marks is to say the cells have different genes or lose genes. They don't — every cell keeps the whole genome; only which genes are switched on differs.

When a cell 'switches a gene on' it lets this whole pathway run for that gene: DNA → mRNA → protein. Switching a gene off blocks transcription, so no mRNA and no protein are made — even though the gene is still physically present in the DNA.

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the two processes that, together, make up the expression of a gene. [1 mark]

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4.1.1Semi-conservative replication & the Meselson-Stahl experiment
4.1.2Enzymes of replication: helicase & DNA polymerase
4.1.3PCR, Taq polymerase & gel electrophoresis
4.1.4The genome & DNA profiling
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