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NotesBiology HLTopic 4.12Ocean acidification and marine ecosystems
Back to Biology HL Topics
4.12.52 min read

Ocean acidification and marine ecosystems

IB Biology • Unit 4

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Contents

  • What ocean acidification is
  • How CO₂ lowers ocean pH and harms calcifiers
  • IB-style question — acidification and coral reefs
The big idea: The ocean absorbs a large share of the extra carbon dioxide (CO₂) that humans put into the air.

When CO₂ dissolves in seawater it makes the water slightly more acidic — its pH falls. This is called ocean acidification.

More acidic water makes it harder for animals to build shells and skeletons out of calcium carbonate — and that is what threatens coral reefs and other marine life.
Ocean acidification
The gradual fall in the pH of seawater caused by the ocean absorbing extra carbon dioxide from the atmosphere.
pH
A scale of how acidic or basic a liquid is. A LOWER pH means MORE acidic (more H⁺ ions).
Carbonic acid
The weak acid formed when carbon dioxide dissolves in water; it releases hydrogen ions (H⁺) that lower the pH.
Carbonate ions (CO₃²⁻)
Ions dissolved in seawater that organisms use to build calcium carbonate shells and skeletons.
Calcification
The process by which corals, molluscs and some plankton build hard parts out of calcium carbonate (CaCO₃).
'Acidification' does not mean acid: Seawater is still slightly basic — acidification means its pH is moving down toward acidic, not that the ocean becomes an acid.

A lower pH = more H⁺ ions = harder to make calcium carbonate. Keep that link in your head: more CO₂ → lower pH → less calcification.

Read this as a chain of cause and effect. Each step causes the next — that is exactly how a 7-mark 'Explain' answer scores marks, so learn the chain in order.

We describe the chemistry in words (there is no equation to memorise for Biology).

The cause-and-effect chain

  • Humans burn fossil fuels (and clear forests), so atmospheric CO₂ rises.
  • The ocean absorbs a large share of this extra CO₂ at its surface.
  • Dissolved CO₂ reacts with water to form carbonic acid, which releases H⁺ ions.
  • More H⁺ ions means the seawater becomes more acidic — its pH falls (acidification).
  • Those extra H⁺ ions react with carbonate ions (CO₃²⁻), so fewer carbonate ions are left.
  • Calcifying organisms (corals, molluscs, some plankton) cannot get enough carbonate, so they build calcium carbonate skeletons and shells more slowly.
  • Existing skeletons and shells can even dissolve in the more acidic water, so structures weaken.
StepWhat happensResult
1. CO₂ risesMore carbon dioxide is in the atmosphere (mostly from burning fossil fuels)More CO₂ is available to dissolve into the sea
2. CO₂ dissolvesThe ocean absorbs a large share of the extra CO₂ at its surfaceDissolved CO₂ reacts with seawater
3. Carbonic acid formsDissolved CO₂ + water → carbonic acid, which releases hydrogen ions (H⁺)More H⁺ ions in the water
4. pH fallsMore H⁺ ions means the water becomes more acidic (lower pH)This is ocean acidification
5. Fewer carbonate ionsThe extra H⁺ ties up carbonate ions (CO₃²⁻) that organisms needLess carbonate is available to build shells and skeletons
Why calcifying organisms are hit hardest: Corals, mussels, snails and some plankton all build hard parts from calcium carbonate (CaCO₃) — they need a steady supply of carbonate ions.

Acidification uses up carbonate ions and makes the water corrosive to calcium carbonate. So these organisms:

Grow their shells/skeletons more slowly (calcification is harder), and

Lose existing material as it slowly dissolves.

Animals without carbonate skeletons are far less affected — that is why the exam keeps the focus on calcifying organisms.
OrganismWhat it builds from calcium carbonateWhy acidification harms it
CoralsA hard reef skeleton (the framework of a coral reef)Less carbonate → skeletons grow more slowly and can dissolve, so reefs weaken
Molluscs (e.g. mussels, snails)Their shellsShells form more slowly and can become thinner or pit/dissolve
Some plankton (e.g. foraminifera, pteropods)Tiny carbonate shells/platesShells weaken; these are a key base of marine food chains
Sea urchins and some crustaceansCalcium carbonate parts of their bodiesSlower, weaker growth of those structures
A memory hook: C–A–C–C: more CO₂ → Acid (carbonic) → Carbonate ions fall → Calcium carbonate is harder to build.

If you can recite that chain, you can answer almost any ocean-acidification question.

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How this is tested: On Paper 2 a 4-mark Describe asks how rising CO₂ may alter a coral-reef ecosystem — score separate points along the chain (CO₂ dissolves → carbonic acid → lower pH → fewer carbonate ions → slower/dissolving coral skeletons → reef decline and lost biodiversity).

A longer 7-mark Explain can combine the causes of rising CO₂ (fossil fuels, deforestation) with its effect on the ocean and marine life — so be ready to link the carbon source to the acidification chain in one answer.

IB-style question — describe how acidification affects a reef

Atmospheric carbon dioxide levels are rising. Describe how this rise may alter a coral reef ecosystem. [4]

How to score all four marks

  1. Get the CO₂ into the water. More atmospheric CO₂ dissolves into the ocean, where it forms carbonic acid and lowers the pH (ocean acidification).
  2. Link pH to carbonate. The lower pH means fewer carbonate ions are available for organisms to use.
  3. Hit the coral. Corals build their calcium carbonate skeletons more slowly, and existing skeletons may dissolve, so the reef structure weakens.
  4. Reach the ecosystem. As the reef framework breaks down there is less habitat and shelter, so biodiversity falls — many fish and invertebrate species decline or are lost. (Award 1 mark per distinct point, up to 4.)

Final answer

More CO₂ dissolves into the sea, forming carbonic acid and lowering the pH (acidification); this leaves fewer carbonate ions, so corals build their calcium carbonate skeletons more slowly and existing skeletons dissolve; the reef weakens and provides less habitat, so biodiversity falls.

✓ Why this scores full marks: Each sentence is a separate link in the chain — dissolving CO₂/lower pH, fewer carbonate ions, slower/dissolving coral skeletons, and the ecosystem knock-on (less habitat → lower biodiversity).

A 'Describe' worth 4 marks needs four distinct points, not the single idea 'corals are harmed' written four ways.

A healthy reef (normal pH)

  • Plenty of carbonate ions available
  • Corals build their skeletons quickly
  • Strong reef structure = lots of habitat and shelter
  • High biodiversity — fish, invertebrates and algae

An acidified reef (lower pH)

  • Fewer carbonate ions for calcification
  • Coral skeletons grow slowly and may dissolve
  • Reef weakens and erodes = less habitat
  • Species are lost → lower biodiversity and fewer fisheries

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the acid that forms when carbon dioxide dissolves in seawater. [1 mark]

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