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NotesBiology HLTopic 3.1Mechanism-based inhibition as a consequence of chemical modification of an enzyme following binding to the active site
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3.1.173 min read

Mechanism-based inhibition as a consequence of chemical modification of an enzyme following binding to the active site (Biology HL)

IB Biology · Unit 3

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Contents

  1. 1Mechanism-based inhibition: Higher Level only
  2. 2Penicillin and transpeptidase
  3. 3Exam-style question (step by step)
Mechanism-based inhibition: Higher Level only: This statement is Higher Level only. Learn penicillin and transpeptidase, and how a changed transpeptidase makes bacteria resistant.

Practise this as you read

  • Explain mechanism-based inhibition.
  • Outline how bacteria become resistant to penicillin.

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The big idea: In mechanism-based inhibition, an inhibitor binds to the active site and then chemically changes it. The binding is irreversible, so the enzyme never works again.
Four panels drawn step by step: transpeptidase building cross-links in a bacterial cell wall; penicillin in its active site; a permanent bond between penicillin and the enzyme, now inactive; a resistant bacterium whose changed enzyme binds its substrate but not penicillin
Mechanism-based inhibition, step by step.

The points to remember

  • Transpeptidase makes the cross-links that hold a bacterial cell wall together.
  • Penicillin binds to its active site and forms a permanent covalent bond with it.
  • Without cross-links the wall is weak, so growing bacteria burst.
  • Resistant bacteria make a changed transpeptidase whose active site penicillin cannot bind.
Remember it as: Bind, react, finished: the enzyme is out of action for good.

Real example: MRSA. Methicillin-resistant Staphylococcus aureus has a changed transpeptidase that penicillin-type antibiotics bind very poorly, so it keeps building its cell wall.

Trap: Penicillin is not a competitive inhibitor: adding more substrate cannot undo it, because the enzyme has been chemically changed.

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How it is asked: Expect penicillin as the example, how the inhibition differs from reversible inhibition, and how bacteria become resistant.
IB-style questionExplain[3 marks]

Explain how penicillin kills bacteria by mechanism-based inhibition.

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how some bacteria are resistant to penicillin because of a change to their transpeptidase. [2 marks]

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